Showing posts with label library. Show all posts
Showing posts with label library. Show all posts

Friday, February 20, 2009

Talks at The Natural History Museum and British Library

Vince Smith has produced a nice flyer for my forthcoming talk at The Natural History Museum on March 17th (11-12).



It will be a busy day as I'm also talking at the British Library in the evening (6pm - 8:30pm), for which Sarah Kemmitt has produced a flyer, and set up a discussion forum on Nature Network. With all this effort going into the artwork, I'd better actually come up with something useful to say.

Wednesday, November 05, 2008

Defrosting the Digital Library


Duncan Hull alerted me to his paper "Defrosting the Digital Library: Bibliographic Tools for the Next Generation Web" (PloS Computational Biology, doi:10.1371/journal.pcbi.1000204). Here's the abstract:

Many scientists now manage the bulk of their bibliographic information electronically, thereby organizing their publications and citation material from digital libraries. However, a library has been described as “thought in cold storage,” and unfortunately many digital libraries can be cold, impersonal, isolated, and inaccessible places. In this Review, we discuss the current chilly state of digital libraries for the computational biologist, including PubMed, IEEE Xplore, the ACM digital library, ISI Web of Knowledge, Scopus, Citeseer, arXiv, DBLP, and Google Scholar. We illustrate the current process of using these libraries with a typical workflow, and highlight problems with managing data and metadata using URIs. We then examine a range of new applications such as Zotero, Mendeley, Mekentosj Papers, MyNCBI, CiteULike, Connotea, and HubMed that exploit the Web to make these digital libraries more personal, sociable, integrated, and accessible places. We conclude with how these applications may begin to help achieve a digital defrost, and discuss some of the issues that will help or hinder this in terms of making libraries on the Web warmer places in the future, becoming resources that are considerably more useful to both humans and machines.

It's an interesting read, and it also <shamless plug>cites my bioGUID project</shamless plug>.

[Image from dave 7]

Sunday, July 06, 2008

Library Git

Just a quick not to make a link between David Shorthouse's post about taxonomic consensus and distributed version control (Taxonomic Consensus as Software Creation), and Galen Charlton's article in The Code4Lib Journal (Distributed Version Control and Library Metadata). Some interesting food for thought here. Both mention Git. If you want to know more, watch Linus Torvald's wonderfully direct talk at Google: