The Business of Extracting Knowledge from Academic Publications

Markus Strasser (@mkstra write a fascinating article entitled "The Business of Extracting Knowledge from Academic Publications".

I spent months working on domain-specific search engines and knowledge discovery apps for biomedicine and eventually figured that synthesizing "insights" or building knowledge graphs by machine-reading the academic literature (papers) is *barely useful* :https://t.co/eciOg30Odc

— Markus Strasser (@mkstra) December 7, 2021

His TL;DR:

TL;DR: I worked on biomedical literature search, discovery and recommender web applications for many months and concluded that extracting, structuring or synthesizing "insights" from academic publications (papers) or building knowledge bases from a domain corpus of literature has negligible value in industry.

Close to nothing of what makes science actually work is published as text on the web.

After recounting the many problems of knowledge extraction - including a swipe at nanopubs which "are ... dead in my view (without admitting it)" - he concludes:

I’ve been flirting with this entire cluster of ideas including open source web annotation, semantic search and semantic web, public knowledge graphs, nano-publications, knowledge maps, interoperable protocols and structured data, serendipitous discovery apps, knowledge organization, communal sense making and academic literature/publishing toolchains for a few years on and off ... nothing of it will go anywhere.

Don’t take that as a challenge. Take it as a red flag and run. Run towards better problems.

Well worth a read, and much food for thought.

A planetary computer for Earth

Came across Microsoft's announcement of a "A planetary computer for a sustainable future through the power of AI", complete with a glossy video featuring Lucas Joppa @lucasjoppa (see also @Microsoft_Green and #AIforEarth).

On the one hand it's great to see super smart people with lots of resources tackling important questions, but it's hard not to escape the feeling that this is the classic technology company approach of framing difficult problems in ways that match the solutions they have to offer. Is the reason that biodiversity is declining simply because we have lacked computational resources, that our AI isn't good enough? And while forests that have been stripped of both their mega fauna and previous human inhabitants make for photogenic backdrops, biodiversity can be a lot messier (and dangerous). Still, it will be interesting to see how this plays out, and what sort of problems the planetary computer is used to tackle.